The detailed information of tRNA gene sequence


Sequence ID>SRA1006248
Genome IDSRR020488.14948
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 133
End posion on genome 57
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position
cattttacat
tRNA gene sequence
TCCTCGGTAGCGTCAGTTGGTAGAGCAGTTGACTGTTAATCAATTGGTCGCAGGTTCGAG
TCCTGCCCGAGGAGCCA
Downstream region at tRNA end position
aaaaatcaaa
Secondary structure (Cloverleaf model)
>SRA1006248	Asn	GTT
                   t      GCCA aaaaatcaaa
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          T G
                    T     C G T C C     A
      G A C        A      | | | | |     G
    T       T G C G       G C A G G     C
    T       +   | |                 T T
    G       G A G C
      G T A        A     TGGTC
                    G + T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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