The detailed information of tRNA gene sequence


Sequence ID>SRA1006259
Genome IDSRR020488.21345
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 87
End posion on genome 159
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttactgttaa
tRNA gene sequence 
GGGGCATTAGCTCAGTTGGTAGAGCGCTTGCATGGCATGCAAGAGGTCAGCGGTTCGACC
CCGCTATGCTCCAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1006259	Ala	GGC
                   a      Annn nnnnnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T
                     T - A          C C
                    T     T C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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