The detailed information of tRNA gene sequence


Sequence ID>SRA1006298
Genome IDSRR020488.35501
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 93
End posion on genome 17
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
aataacctct
tRNA gene sequence
CGGGGCGTAGCGCAGTCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCAGGTTCAAA
TCCTGCCGCCCCGACCA
Downstream region at tRNA end position
ttttatgaaa
Secondary structure (Cloverleaf model)
>SRA1006298	Pro	TGG
                   t      ACCA ttttatgaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | | | |     A
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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