The detailed information of tRNA gene sequence


Sequence ID>SRA1006313
Genome IDSRR020488.41242
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 110
End posion on genome 185
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position
tcttcgctct
tRNA gene sequence
GGGGCTATAGCTCAGCTGGGAGAGCGCCTGATTTGCATTCAGGAGGTCCGCGGTTCGATC
CCGCGTAGCTCCACCA
Downstream region at tRNA end position
ttaatgaaat
Secondary structure (Cloverleaf model)
>SRA1006313	Ala	TGC
                   t      ACCA ttaatgaaat
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     G C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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