The detailed information of tRNA gene sequence


Sequence ID>SRA1006318
Genome IDSRR020488.44280
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 114
End posion on genome 42
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position
nnnnnntttt
tRNA gene sequence
GGCCCGTTCGTCTAGTGGTTAGGACTCATGGTTTTCATCCATGCAACAGGGGTTCGATCC
CCCTACGGGCTGCtt
Downstream region at tRNA end position
ccctttttac
Secondary structure (Cloverleaf model)
>SRA1006318	Glu	TTC
                   t      GCtt ccctttttac
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          C T
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          T     CAAC
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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