The detailed information of tRNA gene sequence


Sequence ID>SRA1006324
Genome IDSRR020488.46403
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 276
End posion on genome 185
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaaatagtta
tRNA gene sequence 
GGAGGGGTGGCAGAGTCTGGCTGATTGCACTGGTCTTGAAAACCAGCGAGGGTTTAGGCC
CTCCGGGGGTTCGAATCCCTCCCCCTCCACAA
Downstream region at tRNA end position 
attagatttt
Secondary structure (Cloverleaf model)
>SRA1006324	Ser	TGA
                   a      ACAA attagatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  T         G A C G       G G G G G     C
  G         + | | |                 T T
  G         T T G C
    C T G A        A     CGAGGGTTTAGGCCCTCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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