The detailed information of tRNA gene sequence


Sequence ID>SRA1006330
Genome IDSRR020488.49287
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 207
End posion on genome 281
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
taaattttta
tRNA gene sequence
ATCGGTTTGGTGTTAGTGGTAGCACGGCAGTCTCCAAAACTGAAGGCGGGGGTTCGATTC
CTCCAACCGGTGCCA
Downstream region at tRNA end position
aataannnnn
Secondary structure (Cloverleaf model)
>SRA1006330	Trp	CCA
                   a      GCCA aataannnnn
                     A - T
                     T + G
                     C - G
                     G - C
                     G - C
                     T - A
                     T - A          T T
                    T     C C T C C     A
      G A T        G      | | + | |     G
    T       T G T G       G G G G G     C
    G       + | | |                 T T
    G       G C A C
      T A          G     AGGC
                    G   A
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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