The detailed information of tRNA gene sequence


Sequence ID>SRA1006335
Genome IDSRR020488.51802
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 219
End posion on genome 135
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
ccaataattt
tRNA gene sequence 
GGGCGAGTGGCGGAATTGGTAGACGCGTTGGTCTTAGGAACCAATAGTGCAAACTGTGAA
GGTTCGAGTCCTTTCTCGCCTACCA
Downstream region at tRNA end position 
taatttatga
Secondary structure (Cloverleaf model)
>SRA1006335	Leu	TAG
                   t      ACCA taatttatga
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C          T G
                    T     T T T C C     A
      T A A        G      + | | | |     G
    T       G G C G       G A A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TAGTGCAAACTGT
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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