The detailed information of tRNA gene sequence


Sequence ID>SRA1006336
Genome IDSRR020488.51953
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 106
End posion on genome 180
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
tccttttatT
tRNA gene sequence
GCGCCGTTAGTTCAGTTGGTAGAACGCAGGTCTCCAAAACCTGATGTCGGGGGTTCAAGT
CCTCCACGGCGCGTtt
Downstream region at tRNA end position
ggaccaacat
Secondary structure (Cloverleaf model)
>SRA1006336	Trp	CCA
                   T      GTtt ggaccaacat
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     C C T C C     A
      T G A        A      | | + | |     A
    T       C T T G       G G G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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