The detailed information of tRNA gene sequence


Sequence ID>SRA1006339
Genome IDSRR020488.52678
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 180
End posion on genome 109
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position
gctccaattt
tRNA gene sequence
GGCTAAGTGGCAGAGTGGTAATGCAGCGGCCTGCAAAGCCGTCAACGCCGGTTCGATTCC
GACCTTAGCCTCat
Downstream region at tRNA end position
tgcaatgtta
Secondary structure (Cloverleaf model)
>SRA1006339	Cys	GCA
                   t      TCat tgcaatgtta
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     A - T
                     G - C          T T
                    T     C A G C C     A
        G A        G      |   | | |     G
      T     G A C G       G C C G G     C
      G       | | |                 T T
      G     A T G C
        T A        A     CAAC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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