The detailed information of tRNA gene sequence


Sequence ID>SRA1006342
Genome IDSRR020488.53341
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 68
End posion on genome 142
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
atattttttT
tRNA gene sequence 
GCCGGTGTAGCTCAGCGGCAGAGCAACTGTCTCGTAAACAGTAGGTCATTGGTTCAATTC
CAATCATCGGCATCt
Downstream region at tRNA end position 
caaaagcaaa
Secondary structure (Cloverleaf model)
>SRA1006342	Thr	CGT
                   T      ATCt caaaagcaaa
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     T - A
                     G - C          T T
                    T     T A A C C     A
        G A        A      | | | | |     A
      C     C T C G       A T T G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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