The detailed information of tRNA gene sequence


Sequence ID>SRA1006360
Genome IDSRR020488.59090
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 146
End posion on genome 70
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
agtgttttta
tRNA gene sequence 
GGGCGTATAGCTCAGGTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCCTTGGTTCAAT
TCCAAGTATGCCCACCA
Downstream region at tRNA end position 
tttaatttta
Secondary structure (Cloverleaf model)
>SRA1006360	Ile	GAT
                   a      ACCA tttaatttta
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     T - A
                     A - T          T T
                    T     G A A C C     A
      G G A        A      | | | | |     A
    T       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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