The detailed information of tRNA gene sequence


Sequence ID>SRA1006380
Genome IDSRR020488.68235
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 27
End posion on genome 97
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position
agtaattttc
tRNA gene sequence
GCGGGTATAGATTAATGGTAGATTCTCTGCCTTCCAAGCAGATTGTATGAGTTCGAATCT
CATTGCCCGCAgtt
Downstream region at tRNA end position
caattttggg
Secondary structure (Cloverleaf model)
>SRA1006380	Gly	TCC
                   c      Agtt caattttggg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T A
                    T     T A C T C     A
        A A        A      | | | | |     G
      T     T T A G       A T G A G     C
      G     + | | +                 T T
      G     G A T T
        T A        C     TTGT
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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