The detailed information of tRNA gene sequence


Sequence ID>SRA1006384
Genome IDSRR020488.69721
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 78
End posion on genome 3
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position
taattgtatt
tRNA gene sequence
GGGGCTGTAGCTCAGTTGGCAGAGCACGTGCATGGCATGCACGGGGTCAGGGGTTCAAAT
CCCCTCAGCTCCACAA
Downstream region at tRNA end position
acnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1006384	Ala	GGC
                   t      ACAA acnnnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T C C C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTC
                    C - G
                    G - C
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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