The detailed information of tRNA gene sequence


Sequence ID>SRA1006401
Genome IDSRR020488.75493
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 116
End posion on genome 189
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position
atttcatatT
tRNA gene sequence
GCCGATATAGCTCAGCGGCAGAGCAACTGTCTCGTAAACAGTAGGTCATTGGTTCAATTC
CAATTATCGGCATtt
Downstream region at tRNA end position
ctattttata
Secondary structure (Cloverleaf model)
>SRA1006401	Thr	CGT
                   T      ATtt ctattttata
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     A - T          T T
                    T     T A A C C     A
        G A        A      | | | | |     A
      C     C T C G       A T T G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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