The detailed information of tRNA gene sequence


Sequence ID>SRA1006416
Genome IDSRR020488.80082
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 292
End posion on genome 217
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position
nnnnnncatg
tRNA gene sequence
GTGGGTGTAGCTCAGCTGGTTAGAGCACCTGGTTGTGGCCCAGGAGGCCGTGGGTTCAAG
TCCCATCACTCACCCAa
Downstream region at tRNA end position
gttttcgggg
Secondary structure (Cloverleaf model)
>SRA1006416	His	GTG
                   g      CCAa gttttcgggg
                     G - C
                     T - A
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T A C C C     A
      C G A        A      + | | | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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