The detailed information of tRNA gene sequence


Sequence ID>SRA1006417
Genome IDSRR020488.80082
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 210
End posion on genome 135
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cccaagtttt
tRNA gene sequence 
CGGGGTATAGCGTAGTCCGGTTAACGCGCCTGCTTTGGGAGCAGGAGATCGGGAGTTCAA
ATCTCTCTACCCCGACac
Downstream region at tRNA end position 
tgtaaaccct
Secondary structure (Cloverleaf model)
>SRA1006417	Pro	TGG
                   t      ACac tgtaaaccct
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C T C T C     A
    C T G A        A      | + | | |     A
  C         T G C G       G G G A G     C
  G         | | | |                 T T
  G         A C G C
    T T A          G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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