The detailed information of tRNA gene sequence


Sequence ID>SRA1006430
Genome IDSRR020488.84892
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 182
End posion on genome 257
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position
ttaagatcat
tRNA gene sequence
GGGGGATTAGCTCAGCTGGGAGAGCGCCTGATTTGCATTCAGGAGGTCAGCGGTTCGATC
CCGCTATCCTCCACCA
Downstream region at tRNA end position
aaacacttag
Secondary structure (Cloverleaf model)
>SRA1006430	Ala	TGC
                   t      ACCA aaacacttag
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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