The detailed information of tRNA gene sequence


Sequence ID>SRA1006434
Genome IDSRR020488.85884
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 148
End posion on genome 75
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position
aaaaaatatt
tRNA gene sequence
GGGGCCATAGCTCAGTTGGTAGAGCACCTGCATGGCATGCAGGGGGTCTGCGGTTCGAAT
CCGCATGGCTCCACtt
Downstream region at tRNA end position
aattaatttt
Secondary structure (Cloverleaf model)
>SRA1006434	Ala	GGC
                   t      ACtt aattaatttt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     A C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       T G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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