The detailed information of tRNA gene sequence


Sequence ID>SRA1006441
Genome IDSRR020488.88450
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 26
End posion on genome 108
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position
ttataataaa
tRNA gene sequence
GCGGATGTGGCGAAATTGGTAGACGCACTAGACTTAGGATCTAGCGCCGAGAGGCATGGG
GGTTCGAGTCCCTCCATCCGCACat
Downstream region at tRNA end position
ttttaaatat
Secondary structure (Cloverleaf model)
>SRA1006441	Leu	TAG
                   a      ACat ttttaaatat
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       A G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGCCGAGAGGCAT
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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