The detailed information of tRNA gene sequence


Sequence ID>SRA1006443
Genome IDSRR020488.89731
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 139
End posion on genome 229
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
tataagaacT
tRNA gene sequence
GGAGAGGTGGCTGAGTGGTTGAAAGCGGCTCCCTGCTAAGGAGTTACAGGAGGTAACTTT
TGTCGAGGGTTCGAATCCCTCCCTCTCCGTac
Downstream region at tRNA end position
ttcattaaga
Secondary structure (Cloverleaf model)
>SRA1006443	Ser	GCT
                   T      GTac ttcattaaga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TACAGGAGGTAACTTTTGTC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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