The detailed information of tRNA gene sequence


Sequence ID>SRA1006446
Genome IDSRR020488.91158
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 123
End posion on genome 49
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
caggcagagc
tRNA gene sequence 
GGCCCGTTCGTCTATCGGTTAGGACGCCAGGTTTTCAACCTGGAAAGACGAGTTCGATTC
TCGTACGGGCTGCCA
Downstream region at tRNA end position 
attaaaaaag
Secondary structure (Cloverleaf model)
>SRA1006446	Glu	TTC
                   c      GCCA attaaaaaag
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     T G C T C     A
      C T A        C      | | | | |     G
    G       T C T G       A C G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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