The detailed information of tRNA gene sequence


Sequence ID>SRA1006447
Genome IDSRR020488.91896
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 218
End posion on genome 143
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position
aaaagtctac
tRNA gene sequence
GCCCTTGTAGCTCAGCTGGTAGAGCAATTGATTTGTAATCAATAGGTCCGCGGTTCGAGT
CCGTGCGGGGGCACCA
Downstream region at tRNA end position
ttaagatgtt
Secondary structure (Cloverleaf model)
>SRA1006447	Thr	TGT
                   c      ACCA ttaagatgtt
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     T + G
                     G - C          T G
                    T     G T G C C     A
      C G A        A      | + | | |     G
    T       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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