The detailed information of tRNA gene sequence


Sequence ID>SRA1006448
Genome IDSRR020488.92688
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 166
End posion on genome 90
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position
ttcgaaattT
tRNA gene sequence
GGGGCCATAGCTCAGCTGGTAGAGCACCTGCATGGCATGCAGGGGGTCAGCGGTTCGAGT
CCGCTTGGTTCCATCA
Downstream region at tRNA end position
ggattttcgc
Secondary structure (Cloverleaf model)
>SRA1006448	Ala	GGC
                   T      ATCA ggattttcgc
                     G - C
                     G - C
                     G + T
                     G + T
                     C - G
                     C - G
                     A - T          T G
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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