The detailed information of tRNA gene sequence


Sequence ID>SRA1006450
Genome IDSRR020488.93484
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 161
End posion on genome 86
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position
caaaagtata
tRNA gene sequence
GGGGCCATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCAGGGGTTCGATC
CCCCTTGGCTCCACCA
Downstream region at tRNA end position
aaaccttaat
Secondary structure (Cloverleaf model)
>SRA1006450	Ala	GGC
                   a      ACCA aaaccttaat
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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