The detailed information of tRNA gene sequence


Sequence ID>SRA1006461
Genome IDSRR020488.96075
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 137
End posion on genome 52
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ttgcctgaat
tRNA gene sequence 
GCTCAAGTGGCGGAATTGGTAGACGCGCTGGATTCAAAATCCAGTTCTTTTTAAGAGTGT
GGGTTCGATTCCCACCTTGAGTACTA
Downstream region at tRNA end position 
aattaaatgg
Secondary structure (Cloverleaf model)
>SRA1006461	Leu	CAA
                   t      ACTA aattaaatgg
                     G + T
                     C - G
                     T - A
                     C - G
                     A - T
                     A - T
                     G - C          T T
                    T     C A C C C     A
      T A A        G      | | | | |     G
    T       G G C G       G T G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TTCTTTTTAAGAGT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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