The detailed information of tRNA gene sequence


Sequence ID>SRA1006486
Genome IDSRR020488.105677
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 79
End posion on genome 155
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
aataatttaa
tRNA gene sequence
GGCGGGGTAGCTCAGTTGGTTAGAGCACAGGACTCATAAGCCTGGGGTCGGTGGTTCGAA
TCCACTCCCCGCTACCA
Downstream region at tRNA end position
aataatttag
Secondary structure (Cloverleaf model)
>SRA1006486	Met	CAT
                   a      ACCA aataatttag
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C A C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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