The detailed information of tRNA gene sequence


Sequence ID>SRA1006505
Genome IDSRR020488.112636
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 3
End posion on genome 92
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
nnnnnnnatT
tRNA gene sequence
GGAGGGGTGGGTCGAGTGGTTTAAGGCTCTAGTCTTGAAAACTAGCGTGTCTGCAAGGGC
ACCGTGGGTTCGAATCCCACCCCCTCCGTtc
Downstream region at tRNA end position
taattacgaa
Secondary structure (Cloverleaf model)
>SRA1006505	Ser	TGA
                   T      GTtc taattacgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T G A G        G      | | | | |     G
  G         C T G G       G T G G G     C
  G           +   |                 T T
  T         A G G C
    T T A          T     CGTGTCTGCAAGGGCACC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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