The detailed information of tRNA gene sequence


Sequence ID>SRA1006540
Genome IDSRR020488.127589
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 178
End posion on genome 94
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position
tctattaatc
tRNA gene sequence
GCGGATATGGTGGAATTGGTAGACACGCTGGTTTTAGGTACCAGTGAGGCAACTCATGGG
GGTTCGAGTCCCTCTATCCGCACCA
Downstream region at tRNA end position
atttgttagt
Secondary structure (Cloverleaf model)
>SRA1006540	Leu	TAG
                   c      ACCA atttgttagt
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       G G T G       G G G G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGAGGCAACTCAT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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