The detailed information of tRNA gene sequence


Sequence ID>SRA1006547
Genome IDSRR020488.128404
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 122
End posion on genome 195
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position
atgtatacaa
tRNA gene sequence
GCGGGCGTAGCTCAGTTGGTAGAGCGACAGCCTTCCAAGCTGTAGGTCGCGGGTTCGAGT
CTCGTCGCCCGCTCtt
Downstream region at tRNA end position
aataggccga
Secondary structure (Cloverleaf model)
>SRA1006547	Gly	TCC
                   a      TCtt aataggccga
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | + |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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