The detailed information of tRNA gene sequence


Sequence ID>SRA1006552
Genome IDSRR020488.130670
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 124
End posion on genome 200
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
caccatataa
tRNA gene sequence
GGGGGTGTAGCTCAGTTGGTTAGAGCGCTGGCCTGTCACGCCAGAGGTCGCGAGTTCAAG
TCTCGTCACTCTCGCCA
Downstream region at tRNA end position
ttaatttaga
Secondary structure (Cloverleaf model)
>SRA1006552	Asp	GTC
                   a      GCCA ttaatttaga
                     G - C
                     G + T
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     A
    T       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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