The detailed information of tRNA gene sequence


Sequence ID>SRA1006578
Genome IDSRR020488.139268
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 189
End posion on genome 105
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
aaattctttt
tRNA gene sequence
GGAGAGGTGCCAGAGTGGTAATGGAGCAGATTGCTAATCTGTCAACGTGTAAACGTTGCC
TGGGTTCGAATCCCAGTCTCTCCGCat
Downstream region at tRNA end position
attttggtcg
Secondary structure (Cloverleaf model)
>SRA1006578	Ser	GCT
                   t      GCat attttggtcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G A C C C     A
        G A        G      | | | | |     G
      T     G A C C       C T G G G     C
      G       | | |                 T T
      G     A T G G
        T A        A     CAACGTGTAAACGTTGC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK