The detailed information of tRNA gene sequence


Sequence ID>SRA1006591
Genome IDSRR020488.144526
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 137
End posion on genome 226
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
ggttgaataa
tRNA gene sequence
GGAAAGGTGGCCGAGTGGTTGAAGGCGCACGCTTGGAAAGCGTGTATGCGGGTGACCGTA
TCGTGGGTTCGAATCCCATCCTTTCCGCCA
Downstream region at tRNA end position
aaattagtca
Secondary structure (Cloverleaf model)
>SRA1006591	Ser	GGA
                   a      GCCA aaattagtca
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATGCGGGTGACCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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