The detailed information of tRNA gene sequence


Sequence ID>SRA1006602
Genome IDSRR020488.148843
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 187
End posion on genome 112
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position
tagttttgtt
tRNA gene sequence
GCCGGAATAGCTCAATTGGCAGAGCAACTGATTTGTAATCAGTAGGTTGGGGGTTCAATT
CCCTCTTCCGGCACCA
Downstream region at tRNA end position
caaaattaat
Secondary structure (Cloverleaf model)
>SRA1006602	Thr	TGT
                   t      ACCA caaaattaat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T T
                    T     C T C C C     A
      T A A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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