The detailed information of tRNA gene sequence


Sequence ID>SRA1006620
Genome IDSRR020488.153461
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 220
End posion on genome 144
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
tcattcgttt
tRNA gene sequence
CGGGGCGTAGCGCAGTCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCAAGTTCGAA
TCTTGCCGCCCCGACCA
Downstream region at tRNA end position
tttgtaaagt
Secondary structure (Cloverleaf model)
>SRA1006620	Pro	TGG
                   t      ACCA tttgtaaagt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G T T C     A
      T G A        A      | | | | |     G
    C       C G C G       G C A A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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