The detailed information of tRNA gene sequence


Sequence ID>SRA1006622
Genome IDSRR020488.154634
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 138
End posion on genome 54
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position
aataaaacca
tRNA gene sequence
GGAGAGGTGGCTGAGTGGTTGAAAGCGAACGACTCGAAATCGTTTAATAGGGAACTATTC
GTGGGTTCGAATCCCACCCTCTCCGtta
Downstream region at tRNA end position
atttatagtt
Secondary structure (Cloverleaf model)
>SRA1006622	Ser	CGA
                   a      Gtta atttatagtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TAATAGGGAACTATTC
                    A - T
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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