The detailed information of tRNA gene sequence


Sequence ID>SRA1006628
Genome IDSRR020488.156507
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 116
End posion on genome 189
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position
tcggaccgtt
tRNA gene sequence
GGCGGGATGGCAGAGTGGTTATGCAGCGGTCTGCAACACCGTATACGCCGGTTCGATTCC
GACTCCCGCCTCCA
Downstream region at tRNA end position
ttaattcctc
Secondary structure (Cloverleaf model)
>SRA1006628	Cys	GCA
                   t      TCCA ttaattcctc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T T
                    T     C A G C C     A
        G A        G      |   | | |     G
      T     G A C G       G C C G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     ATAC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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