The detailed information of tRNA gene sequence


Sequence ID>SRA1006636
Genome IDSRR020488.158592
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 21
End posion on genome 95
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tatcttattt
tRNA gene sequence 
GGCGGAGTAGCTCAGTTGGTTAGAGCAGCGGAATCATAATCCGCGTGTCGGGGGTTCAAG
TCCCTCCTCCGCTACtt
Downstream region at tRNA end position 
gcaaatcatc
Secondary structure (Cloverleaf model)
>SRA1006636	Met	CAT
                   t      ACtt gcaaatcatc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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