The detailed information of tRNA gene sequence


Sequence ID>SRA1006642
Genome IDSRR020488.163178
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 74
End posion on genome 146
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ttttaatatt
tRNA gene sequence 
GCCGATATAGCTCAGCGGTAGAGCAACTGTTTCGTAAACAGTAAGTCATTGGTTCAATTC
CGATTATCGGCACtc
Downstream region at tRNA end position 
caaaagtcaa
Secondary structure (Cloverleaf model)
>SRA1006642	Thr	CGT
                   t      ACtc caaaagtcaa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     A - T          T T
                    T     T A G C C     A
        G A        A      | | + | |     A
      C     C T C G       A T T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AAGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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