The detailed information of tRNA gene sequence


Sequence ID>SRA1006650
Genome IDSRR020488.167453
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 56
End posion on genome 145
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
gctaaatatc
tRNA gene sequence
GGAGAGGTGGCAGAGTGGTCGATCGCGCACGCTTGGAAAGCGTGTAAGGTGTAAAAGCCT
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position
ttccggtcta
Secondary structure (Cloverleaf model)
>SRA1006650	Ser	GGA
                   c      GCCA ttccggtcta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G       +   | |                 T T
    T       T C G C
      C G A        G     TAAGGTGTAAAAGCCTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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