The detailed information of tRNA gene sequence


Sequence ID>SRA1006656
Genome IDSRR020488.169298
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 142
End posion on genome 69
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
atgccttctc
tRNA gene sequence
AGGGGCGTGGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGCGGTTGGGGGTTCGAGT
CCCTCCGCCCCTGCat
Downstream region at tRNA end position
gatgaggtcg
Secondary structure (Cloverleaf model)
>SRA1006656	Trp	CCA
                   c      GCat gatgaggtcg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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