The detailed information of tRNA gene sequence


Sequence ID>SRA1006676
Genome IDSRR020488.174070
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 61
End posion on genome 137
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position
ttgaaacatt
tRNA gene sequence
CGGGGCGTAGCGCAGCCTGGTAGCGCACTTGACTGGGGGTCAAGTGGTCGCAGGTTCAAA
TCCTGCCGTCCCGACCA
Downstream region at tRNA end position
gtttttatga
Secondary structure (Cloverleaf model)
>SRA1006676	Pro	GGG
                   t      ACCA gtttttatga
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | | | |     A
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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