The detailed information of tRNA gene sequence


Sequence ID>SRA1006691
Genome IDSRR020488.178621
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 248
End posion on genome 172
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
atgtatgtga
tRNA gene sequence
CGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCAGAAGTTCAAA
TCTTNTCCCCGCCACCA
Downstream region at tRNA end position
tttagaagca
Secondary structure (Cloverleaf model)
>SRA1006691	Met	CAT
                   a      ACCA tttagaagca
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T N T T C     A
      T G A        A      |   | | |     A
    C       C G A G       A G A A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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