The detailed information of tRNA gene sequence


Sequence ID>SRA1006711
Genome IDSRR020488.185129
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 230
End posion on genome 303
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position
ctttaaaatT
tRNA gene sequence
GCCCTTGTAGCTCAGCGGTAGAGCACTCCCTTGGTAAGGGAGAGGTCTCGGGTTCAAGTC
CCGACGAGGGCAAnn
Downstream region at tRNA end position
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1006711	Thr	GGT
                   T      AAnn nnnnnnnnnn
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     T + G
                     G - C          T G
                    T     A G C C C     A
        G A        A      | | | | |     A
      C     C T C G       T C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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