The detailed information of tRNA gene sequence


Sequence ID>SRA1006730
Genome IDSRR020488.189825
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 120
End posion on genome 196
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position
gaataatttt
tRNA gene sequence
GGGCTGGTAGCTCAGCCGGTTAGAGCGCTACTCTGATAAAGTAGAGGTCGCATGTTCGAG
TCATGCTCAGCCCACCA
Downstream region at tRNA end position
ttcttagttc
Secondary structure (Cloverleaf model)
>SRA1006730	Ile	GAT
                   t      ACCA ttcttagttc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     G + T          T G
                    T     C G T A C     A
      C G A        A      | | | | |     G
    C       C T C G       G C A T G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    T - A
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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