The detailed information of tRNA gene sequence


Sequence ID>SRA1006766
Genome IDSRR020488.202167
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 112
End posion on genome 36
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
ccgacaaagt
tRNA gene sequence
GGGGGTGTAGCTCAGTTGGTTAGAGCGTCCGCCTGTCACGCGGAAGGCCGAGGGTTCGAG
TCCCTTCACTCCCGCCA
Downstream region at tRNA end position
tacataaata
Secondary structure (Cloverleaf model)
>SRA1006766	Asp	GTC
                   t      GCCA tacataaata
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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