The detailed information of tRNA gene sequence


Sequence ID>SRA1006779
Genome IDSRR020488.206434
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 18
End posion on genome 106
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
tcattaaaat
tRNA gene sequence 
GCTCGGGTGGTGGAATTGGTAGACACGTTGGACTTAAAATCCAATGAGCAGTAATGTTCG
TGCGGGTTCAAGTCCCGCCCCGAGTACAA
Downstream region at tRNA end position 
aagggcaaaa
Secondary structure (Cloverleaf model)
>SRA1006779	Leu	TAA
                   t      ACAA aagggcaaaa
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C
                     G - C          T G
                    T     C G C C C     A
      T A A        G      | | | | |     A
    T       G G T G       G C G G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGAGCAGTAATGTTCGT
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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