The detailed information of tRNA gene sequence


Sequence ID>SRA1006793
Genome IDSRR020488.211145
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 16
End posion on genome 107
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
aatgtcatac
tRNA gene sequence
GGAAGAGTGGGTGAGAGGCTGAAACCAGTCGTTTGCTAAATGACCGTGCGAGGAAACTTG
TACCGAGGGTTCGAATCCCTCCTCTTCCGCCA
Downstream region at tRNA end position
ttttctatca
Secondary structure (Cloverleaf model)
>SRA1006793	Ser	GCT
                   c      GCCA ttttctatca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTGCGAGGAAACTTGTACC
                    G - C
                    T - A
                    C - G
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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