The detailed information of tRNA gene sequence


Sequence ID>SRA1006795
Genome IDSRR020488.211830
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 230
End posion on genome 155
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cccttctttt
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCGGCGGTTCGATC
CCGCCTGGCTCCACCA
Downstream region at tRNA end position 
aaaatacttc
Secondary structure (Cloverleaf model)
>SRA1006795	Ala	TGC
                   t      ACCA aaaatacttc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     C C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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