The detailed information of tRNA gene sequence


Sequence ID>SRA1006806
Genome IDSRR020488.215955
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 38
End posion on genome 114
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
attaaaaact
tRNA gene sequence 
GGGATCGTAGTTCAGTTGGTTAGAACGCCGGCCTGTCAAGCCGGAGGTCGCGAGTTCAAG
TCTCGTCGGTCCCGCTA
Downstream region at tRNA end position 
gagaaagcct
Secondary structure (Cloverleaf model)
>SRA1006806	Asp	GTC
                   t      GCTA gagaaagcct
                     G - C
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     A
    T       C T T G       G C G A G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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